IL_4XEJ_361

3D structure

PDB id

4XEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

IRES bound to bacterial Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GGUGGUCC*GGCCAUC

Length

15 nucleotides

Bulged bases

4XEJ|1|B23S|C|2402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4XEJ|1|B23S|G|2396
4XEJ|1|B23S|G|2397
4XEJ|1|B23S|U|2398
4XEJ|1|B23S|G|2399
4XEJ|1|B23S|G|2400
4XEJ|1|B23S|U|2401
4XEJ|1|B23S|C|2402
4XEJ|1|B23S|C|2403
*
4XEJ|1|B23S|G|2414
4XEJ|1|B23S|G|2415
4XEJ|1|B23S|C|2416
4XEJ|1|B23S|C|2417
4XEJ|1|B23S|A|2418
4XEJ|1|B23S|U|2419
4XEJ|1|B23S|C|2420

Current chains

Chain B23S

23S ribosomal RNA

Nearby chains

Chain BL15

50S ribosomal protein L15

Chain BL28

50S ribosomal protein L28

Chain BL33

50S ribosomal protein L33

Chain BL35

50S ribosomal protein L35