IL_4XEJ_379

3D structure

PDB id

4XEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

IRES bound to bacterial Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GGGGGU*GCCGACC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4XEJ|1|B23S|G|2842
4XEJ|1|B23S|G|2843
4XEJ|1|B23S|G|2844
4XEJ|1|B23S|G|2845
4XEJ|1|B23S|G|2846
4XEJ|1|B23S|U|2847
*
4XEJ|1|B23S|G|2869
4XEJ|1|B23S|C|2870
4XEJ|1|B23S|C|2871
4XEJ|1|B23S|G|2872
4XEJ|1|B23S|A|2873
4XEJ|1|B23S|C|2874
4XEJ|1|B23S|C|2875

Current chains

Chain B23S

23S ribosomal RNA

Nearby chains

Chain BL03

50S ribosomal protein L3

Chain BL17

50S ribosomal protein L17

Chain BL19

50S ribosomal protein L19