IL_4XEJ_422

3D structure

PDB id

4XEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

IRES bound to bacterial Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CCCGGGU*GCCUGGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4XEJ|1|B16S|C|1006
4XEJ|1|B16S|C|1007
4XEJ|1|B16S|C|1008
4XEJ|1|B16S|G|1009
4XEJ|1|B16S|G|1010
4XEJ|1|B16S|G|1011
4XEJ|1|B16S|U|1012
*
4XEJ|1|B16S|G|1017
4XEJ|1|B16S|C|1018
4XEJ|1|B16S|C|1019
4XEJ|1|B16S|U|1020
4XEJ|1|B16S|G|1021
4XEJ|1|B16S|G|1022
4XEJ|1|B16S|G|1023

Current chains

Chain B16S

16S ribosomal RNA

Nearby chains

Chain BS14

30S ribosomal protein S14

Chain BS19

30S ribosomal protein S19