IL_4YBB_293

3D structure

PDB id

4YBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution structure of the Escherichia coli ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.1 Å

Loop

Sequence

GGG*UUAC

Length

7 nucleotides

Bulged bases

4YBB|1|DA|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4YBB_293 not in the Motif Atlas

Geometric match to IL_7A0S_092

Geometric discrepancy: 0.335

The information below is about IL_7A0S_092

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_10892.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

58

Unit IDs

4YBB|1|DA|G|880
4YBB|1|DA|G|881
4YBB|1|DA|G|882
*
4YBB|1|DA|U|894
4YBB|1|DA|U|895
4YBB|1|DA|A|896
4YBB|1|DA|C|897

Current chains

Chain DA

23S rRNA

Nearby chains