IL_4YHW_002

3D structure

PDB id

4YHW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast Prp3 (296-469) in complex with fragment of U4/U6 di-snRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.25 Å

Loop

Sequence

ACG*CCU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

4YHW|1|D|A|11
4YHW|1|D|C|12
4YHW|1|D|G|13
*
4YHW|1|F|C|68
4YHW|1|F|C|69
4YHW|1|F|U|70

Current chains

Chain D

U4 snRNA fragment

Chain F

U6 snRNA fragment

Nearby chains