IL_4YY3_055

3D structure

PDB id

4YY3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosomal subunit- HigB complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CAC*GAAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4YY3_055 not in the Motif Atlas

Geometric match to IL_6ZDU_001

Geometric discrepancy: 0.36

The information below is about IL_6ZDU_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_99358.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

8

Unit IDs

4YY3|1|A|C|1407
4YY3|1|A|A|1408
4YY3|1|A|C|1409
*
4YY3|1|A|G|1491
4YY3|1|A|A|1492
4YY3|1|A|A|1493
4YY3|1|A|G|1494

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

30S ribosomal protein S12

Chain Y

Killer protein