#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4break 5 6 71-72-62-73-53-64-5
1 IL_4QIK_0014QIK0.41640D+CRNA (23-mer)U11G12U13G14*C10U11G12cWWcWwcWW
2 IL_4N0T_0044N0T0.00000BU6 snRNAG78A79U80G81*C66C67C68cWWncWWcWWcWW
3 IL_8CRE_4178CRE0.35140CM SSU rRNAG495G496U497C498*G485G486C487cWWncWwncSWcWW
4 IL_7KJT_0027KJT0.36250A tRNAC39C40A41G42*C28U29G30ncWWcWW
5 IL_6ZDU_0016ZDU0.47920CChains: C,DA1283U1284A1285G1286*C1268U1269U1270ncWWcWW
6 IL_4PHY_0034PHY0.65091A+BRNA (26-MER) + RNA (20-mer)G17A18U19C20*G31A33C34cWWcWwncWW
7 IL_7MLW_0077MLW0.74251FGuanidine-I riboswitchG89A90A91A92*U73G75C76cWWcWWcWW
8 IL_6VMY_0016VMY0.60930ACobalamin riboswitchU219C220C221G222*C230A231G232cWWntWHcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UGUG*CUG1
GAUG*CCC1
GGUC*GGC1
CCAG*CUG1
AUAG*CUU1
GAUC*GAAC1
GAAA*UCGC1
UCCG*CAG1
Non-Watson-Crick part of the motif
SequenceCounts
GU*U1
AU*C1
GU*G1
CA*U1
UA*U1
AU*AA1
AA*CG1
CC*A1

Release history

Release3.953.96
Date2025-03-262025-04-23
StatusNew id, 2 parentsExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (8)
  • Basepair signature
    cWW-L-R-L-cWW
    Heat map statistics
    Min 0.35 | Avg 0.54 | Max 0.89
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