IL_4YZV_131
3D structure
- PDB id
- 4YZV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- ACUCUG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 4YZV|1|RA|G|1992
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4YZV_131 not in the Motif Atlas
- Geometric match to IL_7RQB_067
- Geometric discrepancy: 0.0565
- The information below is about IL_7RQB_067
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_76273.1
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 14
Unit IDs
4YZV|1|RA|A|1669
4YZV|1|RA|C|1670
4YZV|1|RA|U|1671
4YZV|1|RA|C|1672
4YZV|1|RA|U|1673
4YZV|1|RA|G|1674
*
4YZV|1|RA|C|1990
4YZV|1|RA|U|1991
4YZV|1|RA|G|1992
4YZV|1|RA|U|1993
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain RE
- 50S ribosomal protein L3
- Chain RO
- 50S ribosomal protein L14
Coloring options: