3D structure

PDB id
4Z3S (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.65 Å

Loop

Sequence
CC*GAG
Length
5 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4Z3S_024 not in the Motif Atlas
Homologous match to IL_7RQB_024
Geometric discrepancy: 0.0527
The information below is about IL_7RQB_024
Detailed Annotation
Single stack bend
Broad Annotation
No text annotation
Motif group
IL_92001.1
Basepair signature
cWW-L-cWW
Number of instances in this motif group
10

Unit IDs

4Z3S|1|1A|C|837
4Z3S|1|1A|C|838
*
4Z3S|1|1A|G|940
4Z3S|1|1A|A|941
4Z3S|1|1A|G|942

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

Chain 18
50S ribosomal protein L35
Chain 1P
50S ribosomal protein L15

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.4472 s