IL_4Z3S_041

3D structure

PDB id

4Z3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

GUGG*CCAUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4Z3S_041 not in the Motif Atlas

Homologous match to IL_9DFE_042

Geometric discrepancy: 0.5932

The information below is about IL_9DFE_042

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4Z3S|1|1A|G|1059
4Z3S|1|1A|U|1060
4Z3S|1|1A|G|1062
4Z3S|1|1A|G|1063
*
4Z3S|1|1A|C|1075
4Z3S|1|1A|C|1076
4Z3S|1|1A|A|1077
4Z3S|1|1A|U|1078
4Z3S|1|1A|C|1079

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains