3D structure

PDB id
4Z3S (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.65 Å

Loop

Sequence
GGAAG*UGACAAC
Length
12 nucleotides
Bulged bases
4Z3S|1|1A|C|1543
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4Z3S_061 not in the Motif Atlas
Homologous match to IL_7RQB_063
Geometric discrepancy: 0.0575
The information below is about IL_7RQB_063
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_02656.1
Basepair signature
cWW-L-R-L-R-L-R-L-cWW
Number of instances in this motif group
2

Unit IDs

4Z3S|1|1A|G|1526
4Z3S|1|1A|G|1527
4Z3S|1|1A|A|1528
4Z3S|1|1A|A|1528|||A
4Z3S|1|1A|G|1529
*
4Z3S|1|1A|U|1540
4Z3S|1|1A|G|1541
4Z3S|1|1A|A|1542
4Z3S|1|1A|C|1543
4Z3S|1|1A|A|1544
4Z3S|1|1A|A|1545
4Z3S|1|1A|C|1546

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


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