3D structure

PDB id
4Z3S (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.65 Å

Loop

Sequence
ACUCUG*CUGU
Length
10 nucleotides
Bulged bases
4Z3S|1|2A|G|1992
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4Z3S_237 not in the Motif Atlas
Geometric match to IL_7RQB_067
Geometric discrepancy: 0.0588
The information below is about IL_7RQB_067
Detailed Annotation
Intercalated tWH
Broad Annotation
Intercalated tWH
Motif group
IL_76273.1
Basepair signature
cWW-L-R-cWW
Number of instances in this motif group
14

Unit IDs

4Z3S|1|2A|A|1669
4Z3S|1|2A|C|1670
4Z3S|1|2A|U|1671
4Z3S|1|2A|C|1672
4Z3S|1|2A|U|1673
4Z3S|1|2A|G|1674
*
4Z3S|1|2A|C|1990
4Z3S|1|2A|U|1991
4Z3S|1|2A|G|1992
4Z3S|1|2A|U|1993

Current chains

Chain 2A
23S Ribosomal RNA

Nearby chains

Chain 2E
50S ribosomal protein L3
Chain 2O
50S ribosomal protein L14

Coloring options:


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