IL_4Z3S_249

3D structure

PDB id

4Z3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

ACGA*UCUAU

Length

9 nucleotides

Bulged bases

4Z3S|1|2A|C|2055, 4Z3S|1|2A|A|2614

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4Z3S_249 not in the Motif Atlas

Homologous match to IL_7RQB_079

Geometric discrepancy: 0.0413

The information below is about IL_7RQB_079

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01206.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

4Z3S|1|2A|A|2054
4Z3S|1|2A|C|2055
4Z3S|1|2A|G|2056
4Z3S|1|2A|A|2057
*
4Z3S|1|2A|U|2611
4Z3S|1|2A|C|2612
4Z3S|1|2A|U|2613
4Z3S|1|2A|A|2614
4Z3S|1|2A|U|2615

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 25

50S ribosomal protein L32

Chain 2E

50S ribosomal protein L3

Chain 2F

50S ribosomal protein L4

Chain 2W

50S ribosomal protein L22