IL_4Z3S_296

3D structure

PDB id

4Z3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

GACAAC*GCUAAUC

Length

13 nucleotides

Bulged bases

4Z3S|1|2a|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4Z3S_296 not in the Motif Atlas

Homologous match to IL_4LFB_009

Geometric discrepancy: 0.0834

The information below is about IL_4LFB_009

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_12745.1

Basepair signature

cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

1

Unit IDs

4Z3S|1|2a|G|148
4Z3S|1|2a|A|149
4Z3S|1|2a|C|150
4Z3S|1|2a|A|151
4Z3S|1|2a|A|152
4Z3S|1|2a|C|153
*
4Z3S|1|2a|G|168
4Z3S|1|2a|C|169
4Z3S|1|2a|U|170
4Z3S|1|2a|A|171
4Z3S|1|2a|A|172
4Z3S|1|2a|U|173
4Z3S|1|2a|C|174

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2t

30S ribosomal protein S20