3D structure

PDB id
4Z3S (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.65 Å

Loop

Sequence
GAAACC*GACUGAC
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4Z3S_306 not in the Motif Atlas
Geometric match to IL_4LFB_019
Geometric discrepancy: 0.0851
The information below is about IL_4LFB_019
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_31561.1
Basepair signature
cWW-L-R-tWH-tWH-L-R-L-cWW
Number of instances in this motif group
1

Unit IDs

4Z3S|1|2a|G|450
4Z3S|1|2a|A|451
4Z3S|1|2a|A|452
4Z3S|1|2a|A|453
4Z3S|1|2a|C|454
4Z3S|1|2a|C|455
*
4Z3S|1|2a|G|476
4Z3S|1|2a|A|477
4Z3S|1|2a|C|479
4Z3S|1|2a|U|480
4Z3S|1|2a|G|481
4Z3S|1|2a|A|482
4Z3S|1|2a|C|483

Current chains

Chain 2a
16S Ribosomal RNA

Nearby chains

Chain 2p
30S ribosomal protein S16

Coloring options:


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