3D structure

PDB id
4Z3S (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.65 Å

Loop

Sequence
CGCUGAC*GGUGGAG
Length
14 nucleotides
Bulged bases
4Z3S|1|1A|G|932
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4Z3S_350 not in the Motif Atlas
Homologous match to IL_9DFE_024
Geometric discrepancy: 0.0519
The information below is about IL_9DFE_024
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_68243.1
Basepair signature
cWW-L-cWW-cWW-R-L-tHS-cWW
Number of instances in this motif group
1

Unit IDs

4Z3S|1|1A|C|844
4Z3S|1|1A|G|845
4Z3S|1|1A|C|846
4Z3S|1|1A|U|847
4Z3S|1|1A|G|848
4Z3S|1|1A|A|849
4Z3S|1|1A|C|850
*
4Z3S|1|1A|G|927
4Z3S|1|1A|G|928
4Z3S|1|1A|U|930
4Z3S|1|1A|G|931
4Z3S|1|1A|G|932
4Z3S|1|1A|A|933
4Z3S|1|1A|G|934

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

Chain 13
50S ribosomal protein L30

Coloring options:


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