IL_4Z3S_362

3D structure

PDB id

4Z3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

CUGUGAAC*GGGAG

Length

13 nucleotides

Bulged bases

4Z3S|1|2A|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4Z3S_362 not in the Motif Atlas

Homologous match to IL_3U4M_004

Geometric discrepancy: 0.4118

The information below is about IL_3U4M_004

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_90775.2

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

30

Unit IDs

4Z3S|1|2A|C|2129
4Z3S|1|2A|U|2130
4Z3S|1|2A|G|2131
4Z3S|1|2A|U|2132
4Z3S|1|2A|G|2133
4Z3S|1|2A|A|2134
4Z3S|1|2A|A|2135
4Z3S|1|2A|C|2136
*
4Z3S|1|2A|G|2155
4Z3S|1|2A|G|2156
4Z3S|1|2A|G|2157
4Z3S|1|2A|A|2158
4Z3S|1|2A|G|2159

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains