IL_4Z8C_337
3D structure
- PDB id
- 4Z8C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GUUG*CACUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4Z8C_337 not in the Motif Atlas
- Homologous match to IL_6CZR_158
- Geometric discrepancy: 0.1801
- The information below is about IL_6CZR_158
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- Minor groove platform
- Motif group
- IL_40144.1
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
4Z8C|1|2a|G|1107
4Z8C|1|2a|U|1108
4Z8C|1|2a|U|1109
4Z8C|1|2a|G|1110
*
4Z8C|1|2a|C|1128
4Z8C|1|2a|A|1129
4Z8C|1|2a|C|1130
4Z8C|1|2a|U|1131
4Z8C|1|2a|C|1132
Current chains
- Chain 2a
- 16S ribosomal RNA
Nearby chains
- Chain 2i
- 30S ribosomal protein S9
- Chain 2j
- 30S ribosomal protein S10
Coloring options: