IL_4ZDO_001

3D structure

PDB id

4ZDO (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of T325S mutant of human SepSecS in complex with selenocysteine tRNA (tRNASec)

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

AUG*CUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01312.12

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

267

Unit IDs

4ZDO|1|E|A|5||A|C
4ZDO|1|E|U|6||A
4ZDO|1|E|G|7||A
*
4ZDO|1|E|C|65||A
4ZDO|1|E|U|66||A
4ZDO|1|E|U|67||A|A

Current chains

Chain E

selenocysteine tRNA

Nearby chains

Chain A

O-phosphoseryl-tRNA(Sec) selenium transferase