IL_4ZNP_001

3D structure

PDB id

4ZNP (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of A pfI Riboswitch Bound to ZMP

Experimental method

X-RAY DIFFRACTION

Resolution

2.94 Å

Loop

Sequence

UAC*GUA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: UAC,GUA

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4ZNP_001 not in the Motif Atlas

Geometric match to IL_6OL3_002

Geometric discrepancy: 0.166

The information below is about IL_6OL3_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

4ZNP|1|A|U|5
4ZNP|1|A|A|6
4ZNP|1|A|C|7
*
4ZNP|1|A|G|42
4ZNP|1|A|U|43
4ZNP|1|A|A|44

Current chains

Chain A

pfI Riboswitch

Nearby chains