IL_4ZSN_071

3D structure

PDB id

4ZSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-wild-type HigB toxin complex bound to a AAA lysine codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGAAU*AUAG

Length

9 nucleotides

Bulged bases

4ZSN|1|RA|A|283

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4ZSN_071 not in the Motif Atlas

Homologous match to IL_7RQB_011

Geometric discrepancy: 0.1657

The information below is about IL_7RQB_011

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

4ZSN|1|RA|C|280
4ZSN|1|RA|G|281
4ZSN|1|RA|A|282
4ZSN|1|RA|A|283
4ZSN|1|RA|U|284
*
4ZSN|1|RA|A|357
4ZSN|1|RA|U|358
4ZSN|1|RA|A|359
4ZSN|1|RA|G|360

Current chains

Chain RA

23S rRNA

Nearby chains