IL_4ZSN_116

3D structure

PDB id

4ZSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-wild-type HigB toxin complex bound to a AAA lysine codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CUAG*CGAAG

Length

9 nucleotides

Bulged bases

4ZSN|1|RA|A|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4ZSN_116 not in the Motif Atlas

Homologous match to IL_7RQB_057

Geometric discrepancy: 0.0782

The information below is about IL_7RQB_057

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

4ZSN|1|RA|C|1437
4ZSN|1|RA|U|1438
4ZSN|1|RA|A|1439
4ZSN|1|RA|G|1440
*
4ZSN|1|RA|C|1551
4ZSN|1|RA|G|1552
4ZSN|1|RA|A|1553
4ZSN|1|RA|A|1554
4ZSN|1|RA|G|1555

Current chains

Chain RA

23S rRNA

Nearby chains