IL_4ZSN_122

3D structure

PDB id

4ZSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-wild-type HigB toxin complex bound to a AAA lysine codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GGAAG*UGACAAC

Length

12 nucleotides

Bulged bases

4ZSN|1|RA|C|1544

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4ZSN_122 not in the Motif Atlas

Homologous match to IL_7RQB_063

Geometric discrepancy: 0.096

The information below is about IL_7RQB_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02656.1

Basepair signature

cWW-L-R-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

4ZSN|1|RA|G|1526
4ZSN|1|RA|G|1527
4ZSN|1|RA|A|1528
4ZSN|1|RA|A|1529
4ZSN|1|RA|G|1530
*
4ZSN|1|RA|U|1541
4ZSN|1|RA|G|1542
4ZSN|1|RA|A|1543
4ZSN|1|RA|C|1544
4ZSN|1|RA|A|1545
4ZSN|1|RA|A|1545|||A
4ZSN|1|RA|C|1546

Current chains

Chain RA

23S rRNA

Nearby chains