IL_4ZSN_181

3D structure

PDB id

4ZSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-wild-type HigB toxin complex bound to a AAA lysine codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GACAAC*GCUAAUC

Length

13 nucleotides

Bulged bases

4ZSN|1|XA|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4ZSN_181 not in the Motif Atlas

Homologous match to IL_4LFB_009

Geometric discrepancy: 0.0592

The information below is about IL_4LFB_009

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_00680.1

Basepair signature

cWW-L-R-tWH-L-R-L-cWW-cWW

Number of instances in this motif group

3

Unit IDs

4ZSN|1|XA|G|148
4ZSN|1|XA|A|149
4ZSN|1|XA|C|150
4ZSN|1|XA|A|151
4ZSN|1|XA|A|152
4ZSN|1|XA|C|153
*
4ZSN|1|XA|G|168
4ZSN|1|XA|C|169
4ZSN|1|XA|U|170
4ZSN|1|XA|A|171
4ZSN|1|XA|A|172
4ZSN|1|XA|U|173
4ZSN|1|XA|C|174

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XT

30S ribosomal protein S20