IL_4ZSN_357

3D structure

PDB id

4ZSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-wild-type HigB toxin complex bound to a AAA lysine codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GGG*CUAC

Length

7 nucleotides

Bulged bases

4ZSN|1|RA|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4ZSN_357 not in the Motif Atlas

Geometric match to IL_4V9F_097

Geometric discrepancy: 0.3594

The information below is about IL_4V9F_097

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_68118.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

27

Unit IDs

4ZSN|1|RA|G|880
4ZSN|1|RA|G|881
4ZSN|1|RA|G|882
*
4ZSN|1|RA|C|894
4ZSN|1|RA|U|895
4ZSN|1|RA|A|896
4ZSN|1|RA|C|897

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RZ

50S ribosomal protein L25