IL_5A8L_006

3D structure

PDB id

5A8L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human eRF1 and the hCMV nascent peptide in the translation termination complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGCCAAG*CGACU

Length

12 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5A8L|1|A|G|4370
5A8L|1|A|G|4371
5A8L|1|A|C|4372
5A8L|1|A|C|4376
5A8L|1|A|A|4377
5A8L|1|A|A|4378
5A8L|1|A|G|4379
*
5A8L|1|A|C|4389
5A8L|1|A|G|4390
5A8L|1|A|A|4391
5A8L|1|A|C|4392
5A8L|1|A|U|4398

Current chains

Chain A

28S RIBOSOMAL RNA

Nearby chains

Chain Q

EUKARYOTIC RELEASE FACTOR ERF1