IL_5A8L_007
3D structure
- PDB id
- 5A8L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human eRF1 and the hCMV nascent peptide in the translation termination complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CG*UGG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5A8L_007 not in the Motif Atlas
- Homologous match to IL_5TBW_107
- Geometric discrepancy: 0.2893
- The information below is about IL_5TBW_107
- Detailed Annotation
- Major groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_48779.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 16
Unit IDs
5A8L|1|A|C|4416
5A8L|1|A|G|4417
*
5A8L|1|A|U|4489
5A8L|1|A|G|4490
5A8L|1|A|G|4491
Current chains
- Chain A
- 28S RIBOSOMAL RNA
Nearby chains
- Chain Q
- EUKARYOTIC RELEASE FACTOR ERF1
- Chain Z
- NASCENT CHAIN
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