IL_5ADY_017

3D structure

PDB id

5ADY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with HflX

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

UAG*CAAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5ADY_017 not in the Motif Atlas

Homologous match to IL_4WF9_014

Geometric discrepancy: 0.2715

The information below is about IL_4WF9_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_76658.1

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

4

Unit IDs

5ADY|1|B|U|293
5ADY|1|B|A|294
5ADY|1|B|G|295
*
5ADY|1|B|C|343
5ADY|1|B|A|344
5ADY|1|B|A|345
5ADY|1|B|A|346
5ADY|1|B|A|347

Current chains

Chain B

23S RRNA

Nearby chains

Chain Y

50S RIBOSOMAL PROTEIN L29