IL_5ADY_061

3D structure

PDB id

5ADY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with HflX

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

5ADY|1|B|A|1420

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5ADY_061 not in the Motif Atlas

Homologous match to IL_7RQB_055

Geometric discrepancy: 0.2373

The information below is about IL_7RQB_055

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

5ADY|1|B|C|1417
5ADY|1|B|G|1418
5ADY|1|B|A|1419
5ADY|1|B|A|1420
5ADY|1|B|G|1421
*
5ADY|1|B|C|1577
5ADY|1|B|U|1578
5ADY|1|B|A|1579
5ADY|1|B|A|1580
5ADY|1|B|G|1581

Current chains

Chain B

23S RRNA

Nearby chains