IL_5ADY_063

3D structure

PDB id

5ADY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with HflX

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

5ADY|1|B|U|1554

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5ADY_063 not in the Motif Atlas

Homologous match to IL_7A0S_053

Geometric discrepancy: 0.2379

The information below is about IL_7A0S_053

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_74317.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

5ADY|1|B|C|1437
5ADY|1|B|U|1438
5ADY|1|B|A|1439
5ADY|1|B|U|1440
*
5ADY|1|B|A|1551
5ADY|1|B|A|1552
5ADY|1|B|A|1553
5ADY|1|B|U|1554
5ADY|1|B|G|1555

Current chains

Chain B

23S RRNA

Nearby chains