IL_5ADY_143
3D structure
- PDB id
- 5ADY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with HflX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- GAAGG*UCGGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ADY_143 not in the Motif Atlas
- Geometric match to IL_8D29_010
- Geometric discrepancy: 0.2449
- The information below is about IL_8D29_010
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
5ADY|1|B|G|1038
5ADY|1|B|A|1039
5ADY|1|B|A|1040
5ADY|1|B|G|1041
5ADY|1|B|G|1042
*
5ADY|1|B|U|1113
5ADY|1|B|C|1114
5ADY|1|B|G|1115
5ADY|1|B|G|1116
5ADY|1|B|C|1117
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 4
- 50S RIBOSOMAL PROTEIN L36
- Chain G
- 50S RIBOSOMAL PROTEIN L6
- Chain V
- 50S RIBOSOMAL PROTEIN L25
Coloring options: