IL_5AJ0_005
3D structure
- PDB id
- 5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo electron microscopy of actively translating human polysomes (POST state).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUGAAUUU*AUUAGUCAG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_24794.1
- Basepair signature
- cWW-L-R-R-L-tHW-cSH-tHH-L-R-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
5AJ0|1|A2|C|30
5AJ0|1|A2|U|31
5AJ0|1|A2|G|32
5AJ0|1|A2|A|33
5AJ0|1|A2|A|34
5AJ0|1|A2|U|35
5AJ0|1|A2|U|36
5AJ0|1|A2|U|37
*
5AJ0|1|A2|A|44
5AJ0|1|A2|U|45
5AJ0|1|A2|U|46
5AJ0|1|A2|A|47
5AJ0|1|A2|G|48
5AJ0|1|A2|U|49
5AJ0|1|A2|C|50
5AJ0|1|A2|A|51
5AJ0|1|A2|G|52
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AL
- 60S ribosomal protein L13
- Chain AN
- 60S ribosomal protein L15
- Chain Aa
- 60S ribosomal protein L27a
- Chain Aj
- 60S ribosomal protein L37
- Chain Ao
- 60S ribosomal protein L36a
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