IL_5AJ0_007
3D structure
- PDB id
- 5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo electron microscopy of actively translating human polysomes (POST state).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGAAUCC*GACAUGUGG
- Length
- 16 nucleotides
- Bulged bases
- 5AJ0|1|A2|G|119, 5AJ0|1|A2|G|148
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_69989.1
- Basepair signature
- cWW-L-R-R-R-R-L-L-L-L-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
5AJ0|1|A2|C|118
5AJ0|1|A2|G|119
5AJ0|1|A2|A|120
5AJ0|1|A2|A|121
5AJ0|1|A2|U|122
5AJ0|1|A2|C|123
5AJ0|1|A2|C|124
*
5AJ0|1|A2|G|143
5AJ0|1|A2|A|144
5AJ0|1|A2|C|145
5AJ0|1|A2|A|146
5AJ0|1|A2|U|147
5AJ0|1|A2|G|148
5AJ0|1|A2|U|149
5AJ0|1|A2|G|150
5AJ0|1|A2|G|151
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain A3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AG
- 60S ribosomal protein L7a
- Chain AN
- 60S ribosomal protein L15
- Chain Ah
- 60S ribosomal protein L35
Coloring options: