IL_5AJ0_049

3D structure

PDB id

5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo electron microscopy of actively translating human polysomes (POST state).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGCGCG*UCGCGC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_79869.1

Basepair signature

cWW-R-cWW-L-R-L-bif-cWW

Number of instances in this motif group

1

Unit IDs

5AJ0|1|A2|G|1072
5AJ0|1|A2|G|1073
5AJ0|1|A2|C|1074
5AJ0|1|A2|G|1075
5AJ0|1|A2|C|1076
5AJ0|1|A2|G|1077
*
5AJ0|1|A2|U|1184
5AJ0|1|A2|C|1185
5AJ0|1|A2|G|1186
5AJ0|1|A2|C|1187
5AJ0|1|A2|G|1188
5AJ0|1|A2|C|1189

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AF

60S ribosomal protein L7

Chain AT

60S ribosomal protein L21