IL_5AJ0_112
3D structure
- PDB id
- 5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo electron microscopy of actively translating human polysomes (POST state).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UGGAAUG*CGAGAGA
- Length
- 14 nucleotides
- Bulged bases
- 5AJ0|1|A2|U|2640, 5AJ0|1|A2|A|2653
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_17283.1
- Basepair signature
- cWW-tSH-tSH-tHS-tSS-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
5AJ0|1|A2|U|2635
5AJ0|1|A2|G|2636
5AJ0|1|A2|G|2637
5AJ0|1|A2|A|2638
5AJ0|1|A2|A|2639
5AJ0|1|A2|U|2640
5AJ0|1|A2|G|2641
*
5AJ0|1|A2|C|2651
5AJ0|1|A2|G|2652
5AJ0|1|A2|A|2653
5AJ0|1|A2|G|2654
5AJ0|1|A2|A|2655
5AJ0|1|A2|G|2656
5AJ0|1|A2|A|2657
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AR
- 60S ribosomal protein L19
- Chain AZ
- 60S ribosomal protein L27
- Chain Ac
- 60S ribosomal protein L30
- Chain Ag
- 60S ribosomal protein L34
- Chain Ap
- 60S ribosomal protein L37a
- Chain BL
- 40S ribosomal protein S11
- Chain BN
- 40S ribosomal protein S13
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