IL_5AJ0_125
3D structure
- PDB id
- 5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo electron microscopy of actively translating human polysomes (POST state).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UCAAAGU*AAUGAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_57391.1
- Basepair signature
- cWW-cWW-L-R-R-R-L-L-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
5AJ0|1|A2|U|3686
5AJ0|1|A2|C|3687
5AJ0|1|A2|A|3688
5AJ0|1|A2|A|3689
5AJ0|1|A2|A|3690
5AJ0|1|A2|G|3691
5AJ0|1|A2|U|3692
*
5AJ0|1|A2|A|3703
5AJ0|1|A2|A|3704
5AJ0|1|A2|U|3705
5AJ0|1|A2|G|3706
5AJ0|1|A2|A|3707
5AJ0|1|A2|A|3708
5AJ0|1|A2|G|3709
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AA
- 60S ribosomal protein L8
- Chain Ai
- 60S ribosomal protein L36
- Chain Ao
- 60S ribosomal protein L36a
- Chain Bw
- Transfer RNA; tRNA
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