IL_5AJ0_133

3D structure

PDB id

5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo electron microscopy of actively translating human polysomes (POST state).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UAG*UGGG

Length

7 nucleotides

Bulged bases

5AJ0|1|A2|G|4145

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01903.1

Basepair signature

cWW-tHS-cWW

Number of instances in this motif group

28

Unit IDs

5AJ0|1|A2|U|3898
5AJ0|1|A2|A|3899
5AJ0|1|A2|G|3900
*
5AJ0|1|A2|U|4143
5AJ0|1|A2|G|4144
5AJ0|1|A2|G|4145
5AJ0|1|A2|G|4146

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AA

60S ribosomal protein L8

Chain AN

60S ribosomal protein L15

Chain Ao

60S ribosomal protein L36a

Chain Bw

Transfer RNA; tRNA