IL_5AJ0_136

3D structure

PDB id

5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo electron microscopy of actively translating human polysomes (POST state).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGA*UGA

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42537.1

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

6

Unit IDs

5AJ0|1|A2|U|3921
5AJ0|1|A2|G|3922
5AJ0|1|A2|A|3923
*
5AJ0|1|A2|U|4030
5AJ0|1|A2|G|4031
5AJ0|1|A2|A|4032

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain Ai

60S ribosomal protein L36

Chain Au

60S ribosomal protein L10a

Chain BB

40S ribosomal protein S3a