IL_5AJ0_201

3D structure

PDB id

5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo electron microscopy of actively translating human polysomes (POST state).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UUCCUUU*AUUCGA

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ0|1|B1|U|115
5AJ0|1|B1|U|116
5AJ0|1|B1|C|117
5AJ0|1|B1|C|118
5AJ0|1|B1|U|119
5AJ0|1|B1|U|120
5AJ0|1|B1|U|121
*
5AJ0|1|B1|A|343
5AJ0|1|B1|U|344
5AJ0|1|B1|U|345
5AJ0|1|B1|C|346
5AJ0|1|B1|G|347
5AJ0|1|B1|A|348

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain BE

40S ribosomal protein S4, Y isoform 1

Chain BI

40S ribosomal protein S8

Chain BL

40S ribosomal protein S11