IL_5AJ0_204
3D structure
- PDB id
- 5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo electron microscopy of actively translating human polysomes (POST state).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUGAC*GGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5AJ0_204 not in the Motif Atlas
- Geometric match to IL_5J7L_274
- Geometric discrepancy: 0.2551
- The information below is about IL_5J7L_274
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_08257.1
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
5AJ0|1|B1|C|188
5AJ0|1|B1|U|189
5AJ0|1|B1|G|190
5AJ0|1|B1|A|191
5AJ0|1|B1|C|192
*
5AJ0|1|B1|G|207
5AJ0|1|B1|G|208
5AJ0|1|B1|A|209
5AJ0|1|B1|U|210
5AJ0|1|B1|G|211
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BI
- 40S ribosomal protein S8
Coloring options: