IL_5AJ0_219

3D structure

PDB id

5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo electron microscopy of actively translating human polysomes (POST state).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAGGGCAAG*CUC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ0|1|B1|G|598
5AJ0|1|B1|A|599
5AJ0|1|B1|G|600
5AJ0|1|B1|G|601
5AJ0|1|B1|G|602
5AJ0|1|B1|C|603
5AJ0|1|B1|A|604
5AJ0|1|B1|A|605
5AJ0|1|B1|G|606
*
5AJ0|1|B1|C|636
5AJ0|1|B1|U|637
5AJ0|1|B1|C|638

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain BC

40S ribosomal protein S2

Chain BJ

40S ribosomal protein S9

Chain BX

40S ribosomal protein S23

Chain Be

40S ribosomal protein S30