IL_5AJ0_231

3D structure

PDB id

5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo electron microscopy of actively translating human polysomes (POST state).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGCGG*CUGAGG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ0|1|B1|C|877
5AJ0|1|B1|G|878
5AJ0|1|B1|C|879
5AJ0|1|B1|G|880
5AJ0|1|B1|G|881
*
5AJ0|1|B1|C|905
5AJ0|1|B1|U|906
5AJ0|1|B1|G|907
5AJ0|1|B1|A|908
5AJ0|1|B1|G|909
5AJ0|1|B1|G|910

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain AR

60S ribosomal protein L19

Chain BL

40S ribosomal protein S11