IL_5AJ0_294

3D structure

PDB id

5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo electron microscopy of actively translating human polysomes (POST state).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGGGG*CGCCGUG

Length

12 nucleotides

Bulged bases

5AJ0|1|A2|G|1342, 5AJ0|1|A2|C|1361

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ0|1|A2|C|1340
5AJ0|1|A2|G|1341
5AJ0|1|A2|G|1342
5AJ0|1|A2|G|1343
5AJ0|1|A2|G|1344
*
5AJ0|1|A2|C|1359
5AJ0|1|A2|G|1360
5AJ0|1|A2|C|1361
5AJ0|1|A2|C|1362
5AJ0|1|A2|G|1363
5AJ0|1|A2|U|1364
5AJ0|1|A2|G|1365

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AC

60S ribosomal protein L4

Chain AL

60S ribosomal protein L13

Chain AN

60S ribosomal protein L15

Chain Aa

60S ribosomal protein L27a