IL_5AJ0_311
3D structure
- PDB id
- 5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo electron microscopy of actively translating human polysomes (POST state).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GCUCAGCGUG*CCGUUGAACCC
- Length
- 21 nucleotides
- Bulged bases
- 5AJ0|1|B1|U|1585, 5AJ0|1|B1|G|1587
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AJ0|1|B1|G|1541
5AJ0|1|B1|C|1542
5AJ0|1|B1|U|1543
5AJ0|1|B1|C|1544
5AJ0|1|B1|A|1545
5AJ0|1|B1|G|1546
5AJ0|1|B1|C|1547
5AJ0|1|B1|G|1548
5AJ0|1|B1|U|1549
5AJ0|1|B1|G|1550
*
5AJ0|1|B1|C|1582
5AJ0|1|B1|C|1583
5AJ0|1|B1|G|1584
5AJ0|1|B1|U|1585
5AJ0|1|B1|U|1586
5AJ0|1|B1|G|1587
5AJ0|1|B1|A|1588
5AJ0|1|B1|A|1589
5AJ0|1|B1|C|1590
5AJ0|1|B1|C|1591
5AJ0|1|B1|C|1592
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BD
- 40S ribosomal protein S3
- Chain BF
- 40S ribosomal protein S5
- Chain BQ
- 40S ribosomal protein S16
- Chain BT
- 40S ribosomal protein S19
- Chain BU
- 40S ribosomal protein S20
- Chain BZ
- 40S ribosomal protein S25
- Chain Bd
- 40S ribosomal protein S29
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