IL_5AJ3_007
3D structure
- PDB id
- 5AJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the small subunit of the mammalian mitoribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UAUCAA*UCAUAACG
- Length
- 14 nucleotides
- Bulged bases
- 5AJ3|1|A|U|112, 5AJ3|1|A|U|138
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_02471.1
- Basepair signature
- cWW-tSS-L-tSH-tSS-tHS-tHS-cWW
- Number of instances in this motif group
- 41
Unit IDs
5AJ3|1|A|U|110
5AJ3|1|A|A|111
5AJ3|1|A|U|112
5AJ3|1|A|C|113
5AJ3|1|A|A|114
5AJ3|1|A|A|115
*
5AJ3|1|A|U|135
5AJ3|1|A|C|136
5AJ3|1|A|A|137
5AJ3|1|A|U|138
5AJ3|1|A|A|139
5AJ3|1|A|A|140
5AJ3|1|A|C|141
5AJ3|1|A|G|142
Current chains
- Chain A
- MITORIBOSOMAL 12S RRNA
Nearby chains
- Chain L
- MITORIBOSOMAL PROTEIN US12M, MRPS12
- Chain O
- MITORIBOSOMAL PROTEIN US15M, MRPS15
- Chain Q
- MITORIBOSOMAL PROTEIN US17M, MRPS17
- Chain j
- MITORIBOSOMAL PROTEIN MS34, MRPS34
- Chain n
- MITORIBOSOMAL PROTEIN MS38, MRPS38
Coloring options: