IL_5AJ3_015
3D structure
- PDB id
- 5AJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the small subunit of the mammalian mitoribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUGCCAG*CGGUCAUAC
- Length
- 16 nucleotides
- Bulged bases
- 5AJ3|1|A|C|258, 5AJ3|1|A|U|260
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_21801.1
- Basepair signature
- cWW-R-tWH-cSW-L-R-R-L-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
5AJ3|1|A|G|241
5AJ3|1|A|U|242
5AJ3|1|A|G|243
5AJ3|1|A|C|244
5AJ3|1|A|C|245
5AJ3|1|A|A|246
5AJ3|1|A|G|247
*
5AJ3|1|A|C|254
5AJ3|1|A|G|255
5AJ3|1|A|G|256
5AJ3|1|A|U|257
5AJ3|1|A|C|258
5AJ3|1|A|A|259
5AJ3|1|A|U|260
5AJ3|1|A|A|261
5AJ3|1|A|C|262
Current chains
- Chain A
- MITORIBOSOMAL 12S RRNA
Nearby chains
- Chain E
- MITORIBOSOMAL PROTEIN US5M, MRPS5
- Chain L
- MITORIBOSOMAL PROTEIN US12M, MRPS12
- Chain X
- MRNA
- Chain Y
- P-SITE AND A-SITE TRNA
- Chain i
- MITORIBOSOMAL PROTEIN MS33, MRPS33
Coloring options: