#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7break 8 9 10 11 12 13 141-142-52-126-96-127-8
1 IL_3J9W_0193J9W0.00002AA SSU rRNAG524U525G526C527C528A529G530*C537G538G539U540A542A544C545cWWncSWtWHntHScWW
2 IL_5AJ3_0155AJ30.34012A SSU rRNAG241U242G243C244C245A246G247*C254G255G256U257A259A261C262cWWcSWntHSntWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GUGCCAG*CGGUAAUAC1
GUGCCAG*CGGUCAUAC1
Non-Watson-Crick part of the motif
SequenceCounts
UGCCA*GGUAAUA1
UGCCA*GGUCAUA1

Release history

Release2.0
Date2017-04-24
StatusNew id, no parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-R-tWH-cSW-L-R-R-L-tHS-cWW
    Heat map statistics
    Min 0.34 | Avg 0.17 | Max 0.34
    Help

    Coloring options:

    IL_3J9W_019:IL_3J9W_019 = 0IL_3J9W_019:IL_5AJ3_015 = 0.3401IL_5AJ3_015:IL_3J9W_019 = 0.3401IL_5AJ3_015:IL_5AJ3_015 = 0IL_3J9W_019IL_5AJ3_015Discrepancy0.000.050.100.150.200.250.30
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