IL_5AJ4_067
3D structure
- PDB id
- 5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 55S mammalian mitoribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUAACU*AUAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5AJ4_067 not in the Motif Atlas
- Homologous match to IL_7RQB_051
- Geometric discrepancy: 0.4814
- The information below is about IL_7RQB_051
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.6
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 14
Unit IDs
5AJ4|1|BA|G|680
5AJ4|1|BA|U|681
5AJ4|1|BA|A|682
5AJ4|1|BA|A|683
5AJ4|1|BA|C|684
5AJ4|1|BA|U|685
*
5AJ4|1|BA|A|692
5AJ4|1|BA|U|693
5AJ4|1|BA|A|694
5AJ4|1|BA|C|695
Current chains
- Chain BA
- MITORIBOSOMAL 16S Ribosomal RNA
Nearby chains
- Chain BW
- MITORIBOSOMAL PROTEIN UL22M, MRPL22
- Chain BX
- MITORIBOSOMAL PROTEIN UL23M, MRPL23
- Chain Bi
- MITORIBOSOMAL PROTEIN ML45, MRPL45
- Chain Bw
- MITORIBOSOMAL PROTEIN ML65, MRPS30
Coloring options: