IL_5AKA_001

3D structure

PDB id

5AKA (explore in PDB, NAKB, or RNA 3D Hub)

Description

EM structure of ribosome-SRP-FtsY complex in closed state

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

GCAGC*GGGUGCC

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AKA|1|7|G|104
5AKA|1|7|C|105
5AKA|1|7|A|106
5AKA|1|7|G|107
5AKA|1|7|C|108
*
5AKA|1|7|G|165
5AKA|1|7|G|166
5AKA|1|7|G|167
5AKA|1|7|U|168
5AKA|1|7|G|169
5AKA|1|7|C|170
5AKA|1|7|C|171

Current chains

Chain 7

4.5S ribosomal RNA

Nearby chains