IL_5AKA_005

3D structure

PDB id

5AKA (explore in PDB, NAKB, or RNA 3D Hub)

Description

EM structure of ribosome-SRP-FtsY complex in closed state

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CGAACCUGG*CCAUAAG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AKA|1|7|C|118
5AKA|1|7|G|119
5AKA|1|7|A|120
5AKA|1|7|A|121
5AKA|1|7|C|122
5AKA|1|7|C|123
5AKA|1|7|U|124
5AKA|1|7|G|125
5AKA|1|7|G|126
*
5AKA|1|7|C|147
5AKA|1|7|C|148
5AKA|1|7|A|149
5AKA|1|7|U|150
5AKA|1|7|A|151
5AKA|1|7|A|152
5AKA|1|7|G|153

Current chains

Chain 7

4.5S ribosomal RNA

Nearby chains

Chain 5

SIGNAL RECOGNITION PARTICLE PROTEIN